Bgee: Gene Expression Evolution

Gene: HMGN1 - ENSG00000205581 - Homo sapiens (human)

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Data parameters
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Gene namesHMGN1

Synonyms:

  • FLJ27265
  • FLJ31471
  • HMG14
  • MGC104230
  • MGC117425
Descriptionhigh mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984]
OrganismHomo sapiens (human) - Taxonomic identifier: 9606 [NCBI]
Gene typeprotein_coding
Expression in structuresEV:0100381: adipose tissue, EV:0100189: amygdala, EV:0100008: anatomical site, EV:0100000: Anatomical System, EV:0100027: aorta, EV:0100026: artery, EV:0100140: bone, EV:0100046: bone marrow, EV:0100164: brain, EV:0100293: cerebellum, EV:0100347: choroid, EV:0100363: cochlea, EHDAA:38: embryo, EV:0100167: frontal lobe, EV:0100018: heart, EV:0100180: hippocampus, EV:0100225: hypothalamus, EV:0100075: ileum, EV:0100130: islet of Langerhans, EV:0100096: kidney, EV:0100089: liver, EV:0100042: lung, EV:0100125: mammary gland, EHDAA:8031: maxilla, EV:0100275: medulla oblongata, EV:0100066: nasopharynx, EV:0100092: pancreas, EV:0100131: pineal gland, EV:0100132: pituitary gland, EV:0100119: placenta, EV:0100104: prostate, EV:0100081: rectum, EV:0100388: renal proximal convoluted tubule, EV:0100348: retina, EV:0100377: skeletal muscle, EV:0100152: skin, EV:0100072: small intestine, EV:0100316: spinal cord, EV:0100373: spinal ganglion, EV:0100055: spleen, EV:0100070: stomach, EV:0100374: sympathetic chain, EV:0100169: temporal lobe, EV:0100102: testis, EV:0100195: thalamus, EV:0100138: thymus, EV:0100058: tongue, OGEO:000001: unknown, EV:0100113: uterus, EV:0100336: visual apparatus ... (all 50) display all
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Expression at developmental stagesHsapDO:0000001: Human developmental stage, HsapDO:0000025: CarnegieStage18, HsapDO:0000029: CarnegieStage22, HsapDO:0000037: fetal stage, HsapDO:0000197: third LMP month, HsapDO:0000200: sixth LMP month, HsapDO:0000058: 21st week post-fertilization, HsapDO:0000175: 2 months, HsapDO:0000110: 16 years, HsapDO:0000087: adult stage, HsapDO:0000116: 22 years, HsapDO:0000118: 24 years, HsapDO:0000120: 26 years, HsapDO:0000121: 27 years, HsapDO:0000122: 28 years, HsapDO:0000123: 29 years, HsapDO:0000130: 36 years, HsapDO:0000136: 42 years, HsapDO:0000142: 48 years, HsapDO:0000149: 55 years, HsapDO:0000151: 57 years, HsapDO:0000157: 63 years, HsapDO:0000158: 64 years, HsapDO:0000160: 66 years, HsapDO:0000161: 67 years, HsapDO:0000162: 68 years, HsapDO:0000167: 73 years, HsapDO:0000095: 80 and over year-old adult, HsapDO:0000044: unknown ... (all 29) display all
Retrieve also the stages by developmental stage browsing or by table view
Expression dataRetrieve expression pattern by anatomy browsing, or developmental stage browsing, or table view.
Or retrieve all raw expression data for this gene.

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Gene family identifierDescriptionPrediction methodGene count
ENSGTV:1227082high mobility group nucleosomal binding domain 2 [Source:Jamboree;Acc:XB-GENE-1015271]Orthologs Vertebrates [?]12

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Data parameters
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Organs / Stages HsapDO:0000001: Human developmental stage HsapDO:0000025: CarnegieStage18 HsapDO:0000029: CarnegieStage22 HsapDO:0000037: fetal stage HsapDO:0000197: third LMP month HsapDO:0000200: sixth LMP month HsapDO:0000058: 21st week post-fertilization HsapDO:0000175: 2 months HsapDO:0000110: 16 years HsapDO:0000087: adult stage HsapDO:0000116: 22 years HsapDO:0000118: 24 years HsapDO:0000120: 26 years HsapDO:0000121: 27 years HsapDO:0000122: 28 years HsapDO:0000123: 29 years HsapDO:0000130: 36 years HsapDO:0000136: 42 years HsapDO:0000142: 48 years HsapDO:0000149: 55 years HsapDO:0000151: 57 years HsapDO:0000157: 63 years HsapDO:0000158: 64 years HsapDO:0000160: 66 years HsapDO:0000161: 67 years HsapDO:0000162: 68 years HsapDO:0000167: 73 years HsapDO:0000095: 80 and over year-old adult HsapDO:0000044: unknown Organs / Stages
EV:0100381: adipose tissue - - - - - - - - - 1 EST (1 library) - - - - - - - - - - - - - - - - - - - EV:0100381: adipose tissue
EV:0100189: amygdala - - - - - - - - - - - - - - - - - - - - - - - - - - - - 6 ESTs (3 libraries) EV:0100189: amygdala
EV:0100008: anatomical site - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2 ESTs (1 library) EV:0100008: anatomical site
EV:0100000: Anatomical System 1 EST (1 library) - - 5 ESTs (2 libraries) - - 4 ESTs (2 libraries) - - 4 ESTs (2 libraries) - - - - 1 EST (1 library) - - - - - - - - - - - - - - EV:0100000: Anatomical System
EV:0100027: aorta - - - - - - - - - - - - - - - - - - - - - - 3 ESTs (1 library) - - - - - - EV:0100027: aorta
EV:0100026: artery - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100026: artery
EV:0100140: bone - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100140: bone
EV:0100046: bone marrow - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100046: bone marrow
EV:0100164: brain - - - 37 ESTs (8 libraries) - - - 4 ESTs (1 library) - - - - - - - - - - - - - - - - - - - - 11 ESTs (2 libraries) - 2 probesets (2 chips) EV:0100164: brain
EV:0100293: cerebellum - - - - - - - - - - - - - - - - - - - - - - - - - 1 RNA-Seq library (1 experiment) - 1 RNA-Seq library (1 experiment) 19 ESTs (3 libraries) EV:0100293: cerebellum
EV:0100347: choroid - - - - - - - - - 2 ESTs (1 library) - - - - - - - - - - - - - - - - - - - EV:0100347: choroid
EV:0100363: cochlea - - - 2 ESTs (1 library) - - - - - - - - - - - - - - - - - - - - - - - - - EV:0100363: cochlea
EHDAA:38: embryo - - 2 ESTs (1 library) - 3 ESTs (2 libraries) - - - - - - - - - - - - - - - - - - - - - - - - EHDAA:38: embryo
EV:0100167: frontal lobe - - - - - 4 ESTs (1 library) - - - - - - - - - - - 1 RNA-Seq library (1 experiment) 1 RNA-Seq library (1 experiment) - - 1 RNA-Seq library (1 experiment) - - - - - - 1 EST (1 library) EV:0100167: frontal lobe
EV:0100018: heart - - - 14 ESTs (1 library) 6 ESTs (1 library) - - - - - - - - - - 1 RNA-Seq library (1 experiment) - - - - 1 RNA-Seq library (1 experiment) - - - - - 1 RNA-Seq library (1 experiment) - 1 EST (1 library) EV:0100018: heart
EV:0100180: hippocampus - - - - - - - - - - - - - 1 EST (1 library) - - - - - - - - - - - - - - 25 ESTs (3 libraries) EV:0100180: hippocampus
EV:0100225: hypothalamus - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100225: hypothalamus
EV:0100075: ileum - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100075: ileum
EV:0100130: islet of Langerhans - - - - - - - - - - - - - - - - - - - - - - - - - - - - 13 ESTs (2 libraries) EV:0100130: islet of Langerhans
EV:0100096: kidney - - - - - - - - - - - - 1 RNA-Seq library (1 experiment) - - - - - - - - - - 1 RNA-Seq library (1 experiment) 1 RNA-Seq library (1 experiment) - - - 6 ESTs (3 libraries) EV:0100096: kidney
EV:0100089: liver - - - 6 ESTs (3 libraries) - - - - - - 1 RNA-Seq library (1 experiment) - - - - - - - - - - - 1 RNA-Seq library (1 experiment) - - - - - - EV:0100089: liver
EV:0100042: lung 12 ESTs (1 library) - - 7 ESTs (1 library) - - - - - 5 ESTs (2 libraries) - - - - - - - - - - - - - - - - - - 5 ESTs (2 libraries) EV:0100042: lung
EV:0100125: mammary gland - - - - - - - - - 1 EST (1 library) - - - - - - - - - - - - - - - - - - - EV:0100125: mammary gland
EHDAA:8031: maxilla - 1 EST (1 library) - - - - - - - - - - - - - - - - - - - - - - - - - - - EHDAA:8031: maxilla
EV:0100275: medulla oblongata - - - - - - - - - - - - - 1 EST (1 library) - - - - - - - - - - - - - - - EV:0100275: medulla oblongata
EV:0100066: nasopharynx - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100066: nasopharynx
EV:0100092: pancreas - - - 3 ESTs (1 library) - - - - - - - - - - - - - - - - - - - - - - - - 2 probesets (2 chips) EV:0100092: pancreas
EV:0100131: pineal gland - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4 ESTs (1 library) EV:0100131: pineal gland
EV:0100132: pituitary gland - - - - - - - - - 1 EST (1 library) - - - - - - - - - - - - - - - - - - 3 ESTs (1 library) EV:0100132: pituitary gland
EV:0100119: placenta - - - - - - - - - 39 ESTs (8 libraries) - - - - - - - - - - - - - - - - - - 3 ESTs (1 library) EV:0100119: placenta
EV:0100104: prostate - - - - - - - - - 6 ESTs (1 library) - - - - - - - - - - - - - - - - - - 2 ESTs (2 libraries) - 2 probesets (2 chips) EV:0100104: prostate
EV:0100081: rectum - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100081: rectum
EV:0100388: renal proximal convoluted tubule - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100388: renal proximal convoluted tubule
EV:0100348: retina - - - 1 EST (1 library) - - - - - 6 ESTs (4 libraries) - - - - - - - - - 6 ESTs (2 libraries) - - - - - - - 2 ESTs (1 library) - EV:0100348: retina
EV:0100377: skeletal muscle - - - - - - - - - 5 ESTs (1 library) - - - - - - - - - - - - - - - - - - 2 ESTs (2 libraries) EV:0100377: skeletal muscle
EV:0100152: skin - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4 ESTs (2 libraries) EV:0100152: skin
EV:0100072: small intestine - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5 ESTs (2 libraries) EV:0100072: small intestine
EV:0100316: spinal cord - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2 probesets (2 chips) EV:0100316: spinal cord
EV:0100373: spinal ganglion - - - - - - - - - - - - - - - - 3 ESTs (1 library) - - - - - - - - - - - - EV:0100373: spinal ganglion
EV:0100055: spleen - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3 ESTs (1 library) EV:0100055: spleen
EV:0100070: stomach - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100070: stomach
EV:0100374: sympathetic chain - - - - - - - - 2 ESTs (1 library) - - - - - - - - - - - - - - - - - - - - EV:0100374: sympathetic chain
EV:0100169: temporal lobe - - - - - - - - - - - 1 RNA-Seq library (1 experiment) - - - - - - - - - - - - - - - - - EV:0100169: temporal lobe
EV:0100102: testis - - - - - - - - - 2 ESTs (2 libraries) - - - 1 RNA-Seq library (1 experiment) - - - - - - - - - - - - - 1 RNA-Seq library (1 experiment) 13 ESTs (3 libraries) EV:0100102: testis
EV:0100195: thalamus - - - - - - - - - - - - - - - - - - - - - - - - - - - - 10 ESTs (2 libraries) EV:0100195: thalamus
EV:0100138: thymus - - - - - - - - - - - - - - - - - - - - - - - - - - - - 7 ESTs (1 library) - 2 probesets (2 chips) EV:0100138: thymus
EV:0100058: tongue - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100058: tongue
OGEO:000001: unknown - - - - - - - - - 2 ESTs (1 library) - - - - - - - - - - - - - - - - - - 6 ESTs (3 libraries) OGEO:000001: unknown
EV:0100113: uterus - - - - - - - - - 2 ESTs (1 library) - - - - - - - - - - - - - - - - - - - EV:0100113: uterus
EV:0100336: visual apparatus - - - 2 ESTs (1 library) - - - - - - - - - - - - - - - - - - - - - - - - 1 EST (1 library) EV:0100336: visual apparatus
Organs / Stages HsapDO:0000001: Human developmental stage HsapDO:0000025: CarnegieStage18 HsapDO:0000029: CarnegieStage22 HsapDO:0000037: fetal stage HsapDO:0000197: third LMP month HsapDO:0000200: sixth LMP month HsapDO:0000058: 21st week post-fertilization HsapDO:0000175: 2 months HsapDO:0000110: 16 years HsapDO:0000087: adult stage HsapDO:0000116: 22 years HsapDO:0000118: 24 years HsapDO:0000120: 26 years HsapDO:0000121: 27 years HsapDO:0000122: 28 years HsapDO:0000123: 29 years HsapDO:0000130: 36 years HsapDO:0000136: 42 years HsapDO:0000142: 48 years HsapDO:0000149: 55 years HsapDO:0000151: 57 years HsapDO:0000157: 63 years HsapDO:0000158: 64 years HsapDO:0000160: 66 years HsapDO:0000161: 67 years HsapDO:0000162: 68 years HsapDO:0000167: 73 years HsapDO:0000095: 80 and over year-old adult HsapDO:0000044: unknown Organs / Stages

Hide | TopGene ontology

DomainGO terms
biological process
  • GO:0010225: response to UV-C [GO]
  • GO:0010224: response to UV-B [GO]
  • GO:0050678: regulation of epithelial cell proliferation [GO]
  • GO:0006325: chromatin organization [GO]
  • GO:0048597: post-embryonic camera-type eye morphogenesis [GO]
  • GO:0000720: pyrimidine dimer repair by nucleotide-excision repair [GO]
  • GO:0006283: transcription-coupled nucleotide-excision repair [GO]
  • GO:0040034: regulation of development, heterochronic [GO]
  • GO:0032786: positive regulation of DNA-dependent transcription, elongation [GO]
cellular component
  • GO:0000785: chromatin [GO]
  • GO:0005737: cytoplasm [GO]
  • GO:0005634: nucleus [GO]
molecular function
  • GO:0003682: chromatin binding [GO]
  • GO:0003677: DNA binding [GO]
  • GO:0031492: nucleosomal DNA binding [GO]

Hide | TopCross-references

Ensembl
EMBL
UniprotKB/TrEMBL
UniprotKB/Swiss-prot
neXtProt