Bgee: Gene Expression Evolution
| File | Description | Last update | Size |
|---|---|---|---|
| Filtered Affymetrix dataset | Browse and download our filtered dataset of normal, high-quality, non-redundant Affymetrix chips. See the documentation for more information about this dataset. | 2012 10th Dec | 51200 Mo |
| HOG.obo | The HOG (Homologous Organs Group) ontology used in Bgee, a homology-strict multi-species anatomical ontology, in OBO format. See the documentation section for more information. | 2012 10th Dec | < 1 Mo |
| Association file to HOGs | The association file between anatomical structures and Homologous Organs Groups. See the documentation section for more information. | 2012 10th Dec | 2 Mo |
| vHOG.obo | The CARO-compliant, vertebrates-only, homology-strict, multi-species anatomical ontology, in OBO format. The vHOG ontology is more formal than the HOG ontology used in Bgee. See the documentation section for more information. | 2012 10th Dec | < 1 Mo |
| Association file to vHOGs | The association file between anatomical structures and vertebrates Homologous Organs Groups (vHOG). See the documentation section for more information. | 2012 10th Dec | 2 Mo |
| Stages.obo | This file contains all the developmental ontologies, and the ontology of metastages [?], in OBO format | 2012 26th Jul | < 1 Mo |
| Association file to metastages | The association file between developmental stages, and metastages [?] | 2012 26th Jul | < 1 Mo |
| Bgee Release 12 as TSV files | This archive contains the full content of the Bgee database Realease 12 as TSV files. A description of these files can be found in the documentation section. Note that some files are very large once uncompressed (dozens of Gb) | 2012 10th Dec | 3868 Mo |
| Bgee Release 12 as MySQL dump | Schema and full content of the MySQL Bgee database as SQL files. A description of the database can be found in the documentation section. | 2012 10th Dec | 6397 Mo |
| homology_ontology.obo | Ontology of homology and related concepts in biology | 2010 26th Apr | < 1 Mo |
| Mapping EMAP to EMAPA | Mapping of the organs in the EMAP ontology to organs and stages in the EMAPA ontology | 2010 26th Apr | < 1 Mo |
| Homolonto software | Homolonto is a software developped in Java, that uses an ontology alignment approach to propose homology relationships between anatomical ontologies | 2010 26th Apr | < 1 Mo |
| Homolonto source code | Java source code of the Homolonto software | 2010 26th Apr | < 1 Mo |
